Profiling Antigen Binding Affinity of B Cell Repertoires in Tumors by Deep Learning Nature Cancer. 2025.
Mapping Cellular Interactions from Spatially Resolved Transcriptomics Data. Nature Methods. 2024. publisher's website
Netie: inferring the evolution of neoantigen–T cell interactions in tumors Nature Methods. 2022 publisher's website
Interpreting the B-cell receptor repertoire with single-cell gene expression using Benisse. Nature Machine Intelligence. 2022. publisher's website
Deep learning-based prediction of the T cell receptor-antigen binding specificity. Nature Machine Intelligence. 2021. publisher's website
Mapping the Functional Landscape of T Cell Receptor Repertoire by Single T Cell Transcriptomics. Nature Methods. 2020. publisher's website
Tumor Neoantigenicity Assessment with CSiN Score Incorporates Clonality and Immunogenicity to Predict Immunotherapy Outcomes. Science Immunology. 2020. publisher's website
NEWS HIGHLIGHTS
Bing Song and Kevin Wang’s antibody-antigen interaction prediction paper is accepted by Nature Cancer!
Dr. Tao Wang is awarded a DOD BCRP grant as partnering PI, together with Dr. Prasanna Alluri as the lead PI.
Dr. Tao Wang is awarded an R01 grant from NIAID!!
We warmly welcome Yangyang Chen, joining Wang lab as a postdoc!!!
James', Yunguan's, and Noah's co first authored paper on cell-2-cell communication detection from spatial transcriptomics data is accepted at Nature Methods!
Big congratulations to Dr. Yuqiu Yang, who has successfully defended his thesis and is now promoted to be an Assistant Instructor at the UTSW School of Public Health